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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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Trained deep neural networks for MSI/dMMR detection in colorectal cancer histology

Authors: Kather, Jakob Nikolas; Ghaffari Laleh, Narmin;

Trained deep neural networks for MSI/dMMR detection in colorectal cancer histology

Abstract

These are trained neural network models in PyTorch format to process tessellated images of colorectal cancer histology samples. The input is expected to be 224x224 px RGB image tiles normalized with the Macenko method. The output is a probability of the image tile for being MSI/dMMR or MSS/pMMR. The models have been trained on eight cohorts but not on the validation cohort. The validation cohorts are: Ex_0 : DACHS Ex_1 : DUSSEL Ex_2 : MECC Ex_3 : QUASAR Ex_4 : RAINBOW Ex_5 : TCGA Ex_6 : UMM Ex_7 : YORKSHIRE Ex_8 : MUNICH The models can be loaded in Python with >>> model = torch.load(path, map_location=torch.device('cpu')) Further details are given in the manuscript.

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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Cancer Research