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doi: 10.5281/zenodo.4654602 , 10.5281/zenodo.843945 , 10.5281/zenodo.2483310 , 10.5281/zenodo.6015018 , 10.5281/zenodo.4589522 , 10.5281/zenodo.3871828 , 10.5281/zenodo.10016545 , 10.5281/zenodo.1145834 , 10.5281/zenodo.5069289 , 10.5281/zenodo.215980 , 10.5281/zenodo.831401 , 10.5281/zenodo.3548774 , 10.5281/zenodo.580770 , 10.5281/zenodo.1041591 , 10.5281/zenodo.1199583 , 10.5281/zenodo.1328295
doi: 10.5281/zenodo.4654602 , 10.5281/zenodo.843945 , 10.5281/zenodo.2483310 , 10.5281/zenodo.6015018 , 10.5281/zenodo.4589522 , 10.5281/zenodo.3871828 , 10.5281/zenodo.10016545 , 10.5281/zenodo.1145834 , 10.5281/zenodo.5069289 , 10.5281/zenodo.215980 , 10.5281/zenodo.831401 , 10.5281/zenodo.3548774 , 10.5281/zenodo.580770 , 10.5281/zenodo.1041591 , 10.5281/zenodo.1199583 , 10.5281/zenodo.1328295
This is a relatively small release focussing just on bug fixes 🐛 - the last release revealed a couple of nasty ones which I felt were bad enough to justify a fast patch.. (99 bugs - fix 1, now you've got 103 bugs) Many thanks to everyone who reports these problems along with example data 🕵🏻 MultiQC updates Allow scientific notation numbers in colour scheme generation Fixed bug with very small minimum numbers that only revelead itself after a bugfix done in the v1.10 release Require at least rich version 9.4.0 to avoid SpinnerColumn AttributeError (#1393) Dropped the Skipping search pattern log message from a warning to debug Moved directory prepending with -d back to before sample name cleaning (as it was before v1.7) (#1264) If linegraph plot data goes above ymax, only discard the data if the line doesn't come back again (#1257) Allow top_modules to be specified as empty dicts (#1274) Properly ignore .snakemake folders as intended (#1395) Module updates bcftools Fixed bug where QUAL value . would crash MultiQC (#1400) bowtie2 Fix bug where HiSAT2 paired-end bar plots were missing unaligned reads (#1230) Deeptools Handle plotProfile data where no upstream / downstream regions have been calculated around genes (#1317) Fix IndexError caused by mysterious -1 in code.. (#1275) FastQC Replace NaN with 0 in the Per Base Sequence Content plot to avoid crashing the plot (#1246) Picard Fixed bug in ValidateSamFile module where additional whitespace at the end of the file would cause MultiQC to crash (#1397) Somalier Fixed bug where using sample name cleaning in a config would trigger a KeyError (#1234)
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