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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: ZENODO
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A vaccine-induced public antibody protects against SARS-CoV-2 and emerging variants

Authors: Zhou, Julian Q;

A vaccine-induced public antibody protects against SARS-CoV-2 and emerging variants

Abstract

These are the processed BCR repertoire bulk sequencing data described in Schmitz, Turner & Liu et al., Immunity, 2021. The raw sequence data are available on SRA under BioProjects PRJNA731610 and PRJNA741267. Summary: Bulk-sorted total plasmablasts and IgDlo enriched B cells from PBMCs and germinal centre B cells from lymph nodes from various timepoints after primary immunization from 22 BNT162b2 vaccinees who had no prior history of infection with SARS-CoV-2. Metadata file: WU368_schmitz_et_al_immunity_2021_meta.tsv Abbreviations: LN = lymph node PB = plasmablast GC = germinal center mAb = monoclonal antibody BCR data file: WU368_schmitz_et_al_immunity_2021_bcr.tsv.gz In addition to the processed bulk sequences, also included are the heavy chains of 37 mAbs (including 2C08) first reported in Turner & O'Halloran et al., Nature, 2021 that had been validated to be spike-binding. The mAbs are annotated as "mab" in the "seq_type" column. Sequence data column description The columns largely follow the AIRR-C Rearrangement format. The main deviation is that CDR3s are used, as opposed to IMGT-defined "junctions". Non-standard columns are noted below. v_call_genotyped: V gene annotation reassigned after individualized genotyping by TIgGER isotype: IGH[ADEGM] cdr3: CDR3 nucleotide sequence cdr3_length: CDR3 nucleotide sequence length cdr3_aa: CDR3 amino acid sequence donor: vaccinee ID sample: sample ID (arbitrary) timepoint: time point at which sample was collected tissue: tissue from which sample was collected sorting: FACS sorting seq_type: sequence type (mAb or bulk)

Related Organizations
Keywords

B cell repertoire, SARS-CoV-2, AIRR-seq, COVID-19, vaccination, Antibody

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
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