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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2021
License: CC BY
Data sources: ZENODO
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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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Pathologist's Annotated Image Tiles for Multi-Class Tissue Classification in Colorectal Cancer

Authors: Altini, Nicola; Marvulli, Tommaso Maria; Caputo, Mariapia; Mattioli, Eliseo; Prencipe, Berardino; Cascarano, Giacomo Donato; Brunetti, Antonio; +4 Authors

Pathologist's Annotated Image Tiles for Multi-Class Tissue Classification in Colorectal Cancer

Abstract

Content The present dataset is related to a study aiming to identify the best method to perform multi-tissue classification from digital histological images. Histological images, completely anomized, come from formalin-fized paraffine-embedded sample of a patient affected by colorectal cancer. Two directories are available: “CRC_image_tiles.zip”: a zipped folder containing tiles (n=5984) annotated by a pathologist, grouped in 7 subdirectories, each of them representing a class ( 150 * 150 px). “Macenko_normalized_CRC_image_tiles.zip”: Macenko-normalized tiles (n=5984) annotated by a pathologist, grouped in 7 subdirectories, each of them representing a class ( 150 * 150 px). Ethical Statement The study has been funded by “Tecnopolo per la Medicina di Precisione (CUP B84I18000540002)”. The institutional Ethic Committee approved the study (Prot n. 780/CE). Info and Data Usage For further details concerning the aforementioned dataset, refer to the paper below. Please cite the following articles if you need this dataset for your research. Altini N. et al. (2021) Multi-class Tissue Classification in Colorectal Cancer with Handcrafted and Deep Features. In: Huang DS., Jo KH., Li J., Gribova V., Bevilacqua V. (eds) Intelligent Computing Theories and Application. ICIC 2021. Lecture Notes in Computer Science, vol 12836. Springer, Cham. https://doi.org/10.1007/978-3-030-84522-3_42 Altini, N., Marvulli, T. M., Zito, F. A., Caputo, M., Tommasi, S., Azzariti, A., ... & Bevilacqua, V. (2023). The Role of Unpaired Image-to-Image Translation for Stain Color Normalization in Colorectal Cancer Histology Classification. Computer Methods and Programs in Biomedicine, 107511. https://doi.org/10.1016/j.cmpb.2023.107511

{"references": ["M. Macenko et al., \"A method for normalizing histology slides for quantitative analysis,\" 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2009, pp. 1107-1110, doi: 10.1109/ISBI.2009.5193250."]}

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Keywords

Deep Learning, Handcrafted Features, Histological tissue classification, Colorectal cancer

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
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1
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Cancer Research