Supplementary information - Assembling Genomes With Complex Genomic Repeats

Update (v2.1.1-mtReads) - Added results from albacore 1.1.0 and guppy 5.0.7: gci_graph_2021-May-25.zip qualmean.png gci_violin.png Update (v2.0.0-mtReads) - Added mitochondrial sequence raw read files (as split and combined fast5 files), and summary statistics (gap-compressed identity, and mean estimated basecaller accuracy): Nbra_CFED_mtDNA_reads.tar gci_graph.zip These data complement the poster and lightning talk to be given by David Eccles at the London Calling conference in 2017: MIMR_EC3_ONTDECAF_t1.fasta.gz -- initial attempt at a genome assembly with Canu v1.4 (3x error corrected) NbL5_ONTDECAF_t1.contigs.flipped.gfa -- assembly graph associated with the corrected genome tangled_web_300.png -- background image of the poster (generated from the Canu GFA)

Related Organizations

Malaghan Institute of Medical Research
New Zealand

Keywords

assembly, nanopore, genome, GFA, canu

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