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ZENODO
Dataset . 2016
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2016
License: CC BY
Data sources: ZENODO
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Heatmaps Of Orthology And Protein Domain Preservation In Rna Processing Complexes Throughout The Fungal Kingdom

Authors: Rodríguez Iglesias, Alejandro; Marconi, Marco; Sesma, Ane; Wilkinson, Mark;

Heatmaps Of Orthology And Protein Domain Preservation In Rna Processing Complexes Throughout The Fungal Kingdom

Abstract

An analysis of the presence/absence of orthologues for Fungal RNA Processing protein complexes, and the presence/absence of the known PFAM protein domains within each protein within these complexes in the organism's proteome. Each image represents one RNA Processing protein complex. Orthology (far left panel in each image) is relative to Yeast, and taken from a query against the EnsEMBL orthology database (black = no orthologue; red = orthologue). Each orthologue was then queried for its PFAM domains, and the non-redundant set of PFAM domains representing each set of orthologous proteins, spanning all species, was then scanned against the complete proteome of each species. The resulting heatmap indicates the presence or absence of that PFAM domain anywhere in the proteome of that species. (black = absent; red = 1 copy; grey->blue = more than one copy)

There is a (machine readable) FAIR Data Descriptor for this dataset at https://zenodo.org/record/161719. This contains the URLs for all species and PFAM domains, ontological terms related to each image within the dataset, and EDAM descriptors of the experiment.

Keywords

fungal evolution, RNA Processing evolution, protein domain shuffling

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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