Intermediate results objects for reproducing unbiased methylation gene set testing paper analyses

Research datakeyboard_double_arrow_right Dataset 28 Aug 2020 English Publisher:ZenodoFunded by:NHMRC | Harnessing the power of g..., NHMRC | Harnessing the power of g...

Authors: Maksimovic, Jovana; Oshlack, Alicia; Phipson, Belinda;

doi: 10.5281/zenodo.4005288 , 10.5281/zenodo.4706148 , 10.5281/zenodo.4005287

Intermediate results objects for reproducing unbiased methylation gene set testing paper analyses

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Abstract

Intermediate results objects that can be used to replicate the analyses presented in "Gene set enrichment analysis for genome-wide DNA methylation data" available at https://www.biorxiv.org/content/10.1101/2020.08.24.265702v1. Instructions for how to incorporate the objects into the analysis can be found at: http://oshlacklab.com/methyl-geneset-testing/gettingStarted.html and the complete analysis code can be cloned from: https://github.com/Oshlack/methyl-geneset-testing.

Related Organizations

Peter MacCallum Cancer Centre
Australia
University of Melbourne
Australia

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