Customized gtf file from Ensembl version 98 mm10

The gtf from Ensembl version 98 (mm10) was filtered to remove readthrough transcripts and all non-coding transcripts from a protein-coding gene. In addition, all genes with the same gene name which overlaps were merged under the same gene id to avoid ambiguous reads. Unfortunately this gtf is not a fully valid gtf. It still works with STAR/cellRanger but not for other applications. A reformated version has been uploaded as a version 2: https://doi.org/10.5281/zenodo.4618029

Related Organizations

École Polytechnique Fédérale de Lausanne EPFL
Switzerland

Keywords

Ensembl version 98 mm 10, Customized gtf, Immunology, Plant Biology, Computational Biology, non-coding transcripts, Marine Biology, protein-coding gene, readthrough transcripts, gene id, Environmental Sciences not elsewhere classified, Genetics, Medicine, Molecular Biology, gene name, Ensembl version 98, Developmental Biology, Biological Sciences not elsewhere classified

Impact byBIP!

	selected citations These citations are derived from selected sources. This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	1
	popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.	Average
	influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	Average
	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average