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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: ZENODO
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Simulated maps for paper " Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning"

Authors: Xiao Wang; Eman Alnabati; Tunde W Aderinwale; Sai Raghavendra Maddhuri Venkata Subramaniya; Genki Terashi; Daisuke Kihara;

Simulated maps for paper " Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning"

Abstract

These folders include simulated EM map files at 6 A and 10 A for 1056 protein-RNA/RNA complex structures. Maps of 6 A are stored in the 'SIMU6' directory while those simulated at 10 A are saved in the 'SIMU10' directory. To verify all the files are downloaded, please go to "SIMU6" and "SIMU10" directory and run the checking script verify_utils.py by "python3 verify_utils.py" to see if the downloading is successful or not. These simulated maps were used in the following paper: Xiao Wang, Eman Alnabati, Tunde W Aderinwale, Sai Raghavendra Maddhuri Venkata Subramaniya, Genki Terashi & Daisuke Kihara. Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning. Nature Communications (2021). The simulated maps were generated by the pdb2vol program of the SITUS package. Please read the papers for more details. For each PDB entry, 3 files are included: .pdb (PDB file), mrc (simulated map file), and _reso (simulated resolution). For any questions or further assistance, please contact by email to Daisuke Kihara: dkihara@purdue.edu.

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Simulated Cryo-EM maps

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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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