Accompanying files to the publication "CladeOScope: elucidating functional interactions via a clade co-evolution prism" The files attached here constitute the phylogenetic profiling matrices required to reproduce the method and its comparisons as detailed in the publication. For more details and the code required to reproduce the publication please read the publication and visit the following github repository: https://github.com/dst1/CladeOScope To cite our paper use the following citation (bibtex): @article{Tsaban_2021, doi = {10.1093/nargab/lqab024}, url = {https://doi.org/10.1093%2Fnargab%2Flqab024}, year = 2021, month = {apr}, publisher = {Oxford University Press ({OUP})}, volume = {3}, number = {2}, author = {Tomer Tsaban and Doron Stupp and Dana Sherill-Rofe and Idit Bloch and Elad Sharon and Ora Schueler-Furman and Reuven Wiener and Yuval Tabach}, title = {{CladeOScope}: functional interactions through the prism of clade-wise co-evolution}, journal = {{NAR} Genomics and Bioinformatics} }