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Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/80 This error typically occurs when the user has sequences that are not perfectly one-hot encoded - i.e. some columns are all-zeros (usually because the one-hot encoding procedure mapped Ns to all-zeros). This can result in a PPM where the probabilities don't sum to 1 in all the rows. The error is thrown when computing the information content for visualization purposes. The information content can still be calculated by simply renormalizing the rows to sum to 1, so that's what this workaround does (after printing a warning). The user should still make sure that they are ok with this behavior.
| selected citations These citations are derived from selected sources. This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 0 | |
| popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network. | Average | |
| influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Average | |
| impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Average |
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