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ZENODO
Dataset . 2021
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ZENODO
Dataset . 2021
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ZENODO
Dataset . 2021
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Data sources: Datacite
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ZENODO
Dataset . 2021
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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2021
License: CC BY
Data sources: ZENODO
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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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Dataset . 2021
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Dataset . 2021
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ZENODO
Dataset . 2021
License: CC BY
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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2021
License: CC BY
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Smithsonian figshare
Dataset . 2021
License: CC BY
Data sources: Bielefeld Academic Search Engine (BASE)
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Jul2021 reference datasets for Mitohelper

Research datakeyboard_double_arrow_right Dataset 05 Jan 2021Publisher:Zenodo
Authors: Lim,Jean; Thompson,Luke;

doi: 10.5281/zenodo.5059742 , 10.5281/zenodo.4458571 , 10.5281/zenodo.4663344 , 10.5281/zenodo.4892036 , 10.5281/zenodo.4589660 , 10.5281/zenodo.4420495

Jul2021 reference datasets for Mitohelper

Abstract

Reference datasets (Jul 2021 update) for Mitohelper (https://github.com/aomlomics/mitohelper) Mitohelper is a repository built to facilitate experimental design, alignment visualization, and reference sequence analysis in fish eDNA studies. Refer to our paper and Mitohelper's wiki for database construction pipeline. I. Reference database files in tab-separated format, containing gene, taxonomy, and sequence information: mitofish.all.Jul2021.tsv (701,894 records) mitofish.12S.Jul2021.tsv (38,451 records) mitofish.COI.Jul2021.tsv (239,330 records) II. De-replicated QIIME 2-compatible 12S/12S+16S+18S rRNA reference datasets: 12S-seqs-derep-uniq.qza 12S-tax-derep-uniq.qza 12S-16S-18S-seqs.qza 12S-16S-18S-tax.qza If you use Mitohelper, please cite: Jean Lim, S, Thompson, LR. Mitohelper: A mitochondrial reference sequence analysis tool for fish eDNA studies. Environmental DNA. 2021; 00: 1– 10. https://doi.org/10.1002/edn3.187

Related Organizations
Keywords

Pharmacology, fish, Immunology, Information Systems not elsewhere classified, Plant Biology, Marine Biology, Biochemistry, Microbiology, Sociology, metabarcoding, Genetics, eDNA, Biological Sciences not elsewhere classified

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
0
Average
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8
Related to Research communities
European Marine Science