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ZENODO
Dataset . 2020
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2020
License: CC BY
Data sources: ZENODO
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2020
License: CC BY
Data sources: Datacite
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Supplementary materials for "Relative Information Gain: Shannon entropy-based measure of the relative structural conservation in RNA alignments"

Research datakeyboard_double_arrow_right Dataset 01 Dec 2020 English Publisher:Zenodo
Authors: Pietrosanto, Marco; Adinolfi, Marta; Guarracino, Andrea; Ferrè, Fabrizio; Ausiello, Gabriele; Vitale, Ilio; Helmer-Citterich, Manuela;

doi: 10.5281/zenodo.4299601 , 10.5281/zenodo.4299600

Supplementary materials for "Relative Information Gain: Shannon entropy-based measure of the relative structural conservation in RNA alignments"

Abstract

Supplementary materials for "Relative Information Gain: Shannon entropy-based measure of the relative structural conservation in RNA alignments". These include precalculated RNA Blocks, MBRs (Matrix of Bear encoded RNA), sPSSMs (structural Position Specific Scoring Matrix), RIG (Relative Information Gain) scores, and plots calculated for 3016 Rfam 14.1 families. In particular: alignments.zip: zipped file containing the structural alignments for each Rfam family. RNA_Blocks.zip: zipped file containing the RNA blocks used to derive different substitution matrices. MBRs.zip: zipped file containing the substitution matrices. sPSSMs.zip: zipped file containing the structural Position Specific Scoring Matrices. RIGs.zip: zipped file containing the RIG scores. entropy.zip: zipped file containing the (rescaled) entropy. plots.zip: zipped file containing the plots. All the scripts to build all these files are available at https://github.com/helmercitterich-lab/RIG.

Keywords

rna-secondary-structure, shannon-entropy, encoding, bear

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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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