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The LDhat `complete` tool uses the method of Fearnhead and Donnelly (2001) to calculate coalescent likelihoods (via importance sampling) for all possible two-locus haplotype configurations for a given number of sequences for a grid of recombination rate (rho) values. See the LDhat documentation. We considered the case of 320 sequences, for which there are 708400 configurations. Generating this table was computationally expensive (approximately 60,000 CPU hours), hence the interest in sharing it for reuse. The included sbatch job script illustrates how the computations were done (with GNU Parallel). The script could be adapted to compute a similar table on Linux clusters that use Slurm for cluster management/job scheduling.
citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 0 | |
popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network. | Average | |
influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Average | |
impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Average |
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