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SNP Individual Private Allele Distributions

Authors: Samantha L. R. Capel;

SNP Individual Private Allele Distributions

Abstract

This script was designed to identify the distribution of private alleles among individuals of a population of interest following identification of private alleles among populatios of origin (see https://github.com/slcapel/snp-population-level-private-allele-tracker). While it is informative to identify the population-level distribution of private alleles present via maintenance and introgression, it can be equally important to understand how those private alleles are distributed among individuals of said population. The final products of this script are a modified VCF file containing individual genotypes for private alleles and a .tsv file with sums of private alleles from each population of origin for each individual.

Related Organizations
Keywords

private alleles, population genomics, Individual ancestry, RADseq, gene flow

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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