Source code: Impact of admixture and ancestry on eQTL analysis and GWAS colocalization in GTEx

{"references": ["Nicole R. Gay, Michael Gloudemans, Margaret L. Antonio, Brunilda Balliu, YoSon Park, Alicia R. Martin, Shaila Musharoff, Abhiram Rao, Fran\u00e7ois Aguet, Alvaro Barbeira, Rodrigo Bonazzola, Farhad Hormozdiari, GTEx Consortium, Kristin G. Ardlie, Christopher D. Brown, Hae Kyung Im, Tuuli Lappalainen, Xiaoquan Wen, Stephen B. Montgomery. Impact of admixture and ancestry on eQTL analysis and GWAS colocalization in GTEx. Preprint at https://www.biorxiv.org/content/10.1101/836825v1 (2019). doi: https://doi.org/10.1101/836825"]}

This version of the source code reflects analyses included in the peer-reviewed manuscript "Impact of admixture and ancestry on eQTL analysis and GWAS colocalization in GTEx" provisionally accepted for publication. Please refer to the preprint for the original, non-peer-reviewed version of the manuscript: https://www.biorxiv.org/content/10.1101/836825v1 Find the repository on GitHub: https://github.com/nicolerg/gtex-admixture-la

Related Organizations

Stanford University
United States

Keywords

gene expression, admixture, population structure, GTEx, eQTL, local ancestry, colocalization

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