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Dataset . 2020
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2020
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2020
License: CC BY
Data sources: ZENODO
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2020
License: CC BY
Data sources: ZENODO
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Bias Away - Background sequence repositories

Research datakeyboard_double_arrow_right Dataset 30 Jun 2020Publisher:Zenodo
Authors: Anthony Mathelier; Aziz Khan; Rafael Riudavets Puig; Paul Boddie;

doi: 10.5281/zenodo.3923865 , 10.5281/zenodo.3923866

Bias Away - Background sequence repositories

Abstract

This repository contains all Background Sequences available for the following modules of our BiasAway web interface: Mononucleotide distribution matched (subcommand g in the command-line tool). Mononucleotide distribution within a sliding window (subcommand c in the command-line tool). For every organism, we provide background sequences with the following lengths: 100bp, 250bp, 500bp, 750bp and 1000bp. The genome assemblies used were: Homo sapiens: hg38. Mus musculus: mm10. Rattus norvegicus: Rnor_6.0. Arabidopsis thaliana: TAIR10. Danio rerio: GRCz11. Drosophila melanogaster: dm6. Caenorhabditis elegans: WBcel235. Saccharomyces cerevisiae: R64-1-1. Schizosaccharomyces pombe: ASM294v2. The code and necessary documentation to generate them can be found at our BitBucket repository. The documentation for the BiasAway tool can be found at readthedocs.

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