Bias Away - Background sequence repositories

This repository contains all Background Sequences available for the following modules of our BiasAway web interface: Mononucleotide distribution matched (subcommand g in the command-line tool). Mononucleotide distribution within a sliding window (subcommand c in the command-line tool). For every organism, we provide background sequences with the following lengths: 100bp, 250bp, 500bp, 750bp and 1000bp. The genome assemblies used were: Homo sapiens: hg38. Mus musculus: mm10. Rattus norvegicus: Rnor_6.0. Arabidopsis thaliana: TAIR10. Danio rerio: GRCz11. Drosophila melanogaster: dm6. Caenorhabditis elegans: WBcel235. Saccharomyces cerevisiae: R64-1-1. Schizosaccharomyces pombe: ASM294v2. The code and necessary documentation to generate them can be found at our BitBucket repository. The documentation for the BiasAway tool can be found at readthedocs.

Related Organizations

Stanford University
United States
University of Oslo
Norway

Impact byBIP!

	selected citations These citations are derived from selected sources. This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	0
	popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.	Average
	influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	Average
	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average