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Code used in article "Detecting corticospinal tract impairment in tumor patients with fiber density and tensor-based metrics".

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 29 Mar 2020Publisher:Zenodo

Authors: Fekonja, Lucius Samo; Wang, Ziqian; Aydogan, Dogu Baran; Roine, Timo; Engelhardt, Melina; Dreyer, Felix R.; Vajkoczy, Peter; +1 Authors

doi: 10.5281/zenodo.3732348 , 10.5281/zenodo.3744339

Code used in article "Detecting corticospinal tract impairment in tumor patients with fiber density and tensor-based metrics".

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Abstract

Here we publish the code used in our "Detecting corticospinal tract impairment in tumor patients with fiber density and tensor-based metrics" article. The code for MRtrix3 is based on version 3.0_RC3_latest-66-g323bc8ac 64 bit release version, built Dec 11 2019 (https://github.com/MRtrix3/mrtrix3). The code for R is based on RStudio Version 1.2.5019, with R version 3.6.1 (2019-07-05) -- "Action of the Toes", Copyright (C) 2019. The R Foundation for Statistical Computing. Platform: x86_64-apple-darwin15.6.0 (64-bit).

The authors acknowledge the support of the Cluster of Excellence Matters of Activity. Image Space Material funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany´s Excellence Strategy – EXC 2025.

Related Organizations

Charité - University Medicine Berlin
Germany
Freie Universität Berlin
Germany
Aalto University
Finland
University of the Sciences
United States

Keywords

Neuroimaging, Glioma, Diffusion weighted MRI, Tractography, Motor function, Along tract statistical analysis, Corticospinal tract, MRI

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Code used in article "CSD-based metric for along-tract statistical analysis in primary motor tumor patients".
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Code used in article "Detecting corticospinal tract impairment in tumor patients with fiber density and tensor-based metrics".

Code used in article "Detecting corticospinal tract impairment in tumor patients with fiber density and tensor-based metrics".

2 Research products, page 1 of 1

Code used in article "CSD-based metric for along-tract statistical analysis in primary motor tumor patients".

Code used in article "CSD-based metric for along-tract statistical analysis in primary motor tumor patients".