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Bioisosteric Replacement of Arylamide-linked Spine Residues by N-Acylhydrazones and Selenophenes as Design Strategy to Novel Dibenzosuberone Derivatives as Type I½ p38a MAP Kinase Inhibitors

Authors: Pedreira, Júlia G. B.; Nahidino, Philipp; Kudolo, Mark; Pantsar, Tatu; Berger, Benedict-Tilman; Michael Forster; Knapp, Stefan; +2 Authors

Bioisosteric Replacement of Arylamide-linked Spine Residues by N-Acylhydrazones and Selenophenes as Design Strategy to Novel Dibenzosuberone Derivatives as Type I½ p38a MAP Kinase Inhibitors

Abstract

The supplementary movies, pdb-coordinates for the presented snapshots of the simulations, pdb-coordinates of the docking pose and full-length raw trajectories related to the publication: Bioisosteric Replacement of Arylamide-linked Spine Residues by N-Acylhydrazones and Selenophenes as Design Strategy to Novel Dibenzosuberone Derivatives as Type I½ p38a MAP Kinase Inhibitors Contents: Movies of MD simulations of compound 4a and 4b (.mpg files), where each replica (I-III) is a 3.6 µs simulation. 4a_I.mpg; 4a_II.mpg; 4a_III.mpg; 4b_I.mpg; 4b_II.mpg; 4b_III.mpg PDB coordinates (.pdb -files) for the observed conformations of each replica simulation at 1000 ns, 2000 ns and 3000 ns. 4a_I_1000ns.pdb; 4a_I_2000ns.pdb; 4a_I_3000ns.pdb; 4a_II_1000ns.pdb; 4a_II_2000ns.pdb; 4a_II_3000ns.pdb; 4a_III_1000ns.pdb; 4a_III_2000ns.pdb; 4a_III_3000ns.pdb; 4b_I_1000ns.pdb; 4b_I_2000ns.pdb; 4b_I_3000ns.pdb; 4b_II_1000ns.pdb; 4b_II_2000ns.pdb; 4b_II_3000ns.pdb; 4b_III_1000ns.pdb; 4b_III_2000ns.pdb; 4b_III_3000ns.pd PDB coordinates (.pdb -file) for the highest scoring Induced Fit Docking (IFD) pose of compound 4d. 4d_IFD_pose.pdb Full-length raw-trajectories (-out.cms and desmond trajectory files) of the conducted MD simulations. 4a_I_trj.zip; 4a_II_trj.zip; 4a_III_trj.zip; 4b_I_trj.zip; 4b_II_trj.zip; 4b_III_trj.zip

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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