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ZENODO
Software . 2020
Data sources: ZENODO
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Improved user experience and speed-up

Authors: Anders Kaestner; Chiara Carminati;

Improved user experience and speed-up

Abstract

In this release, we continued working on the performance of some algorithms and modules. The reconstruction filter has now moved to become a part of the back projector module, it is still available as preprocessing for those who still want it as a separate module. A new feature is that a publication list for the used modules is now saved in the same location as the reconstructed slices. Each used publication is cited with its corresponding DOI. We have also increased the portability of the configuration files, which now can be moved between different computers. Once again we have added some new GUI features like a preview of reference images. A handy feature if you suspect something is wrong with your reference data. Also, the preprocessing chain has now been equipped with a progress dialog that allows the user to cancel the loading procedure in case there is a wish to abort the configuration. The algorithm modules that have been updated are the Morphspot clean which is now more robust and also got a speed-up mainly thanks to the introduction of multithreading. The black body correction also obtained the option to load a single file for the tomography use case. Of course, we also fixed many issues reported by users and ourselves. A complete list of implemented features and fixed problems is provided below. Please note: To use this new version it is as always recommended to delete the CurrentRecon.xml file. Fixed issues Issue 407 - Change label in center dialog Issue 406 - Recon from list file separator Issue 404 - CBCT doesn't add any publication Issue 402 - Muhrec debug messages in the log Issue 401 - MuhRec Memory limit dialog Issue 400 - Imageviewer widget histograms Issue 392 - MuhRec - config modules receives unprocessed images Issue 381 - kipl::base::morphology LabelImage crashes on Win Issue 374 - BB - exception is not thrown when automatic segmentation fails Issue 371 - MuhRec: module dialogs don't open after merging issue123_configfiles Issue 370 - BB module, add automatic counting of external background images Issue 365 - MorphSpotClean crashes on windows Issue 355 - Wavelet ring cleaning crashing Issue 346 - Add roi labels Issue 343 - Plot widget updates Issue 340 - Image viewer levels sensitive to nan and inf Issue 334 - Reconstruction by dilation hangs Issue 328 - Move the recon filter to backprojector Issue 322 - Slices to multi frame tiff Issue 315 - Revise skiplist dialog Issue 310 - MuhRec - add Exceptions when reference images and projection data have different sizes Issue 308 - MuhRec - Crashing after "Get piercing point" Issue 306 - Add new defaults to polynomial correction Issue 303 - golden ratio order Issue 299 - MuhRec doesn't delete CurrentRecon Issue 298 - PyBind Imaging algorithms Issue 297 - Modules to produce citations in reporting Issue 296 - CBCT doesn't return correct attune coefs Issue 295 - MuhRec: CBCT feedback Issue 294 - MuhRec - BB plugin option for single external BB images Issue 282 - Muhrec: implement inspection of references Issue 281 - MuhRec: Revise center of rotation Issue 273 - Review how we get more conform to the FAIR principle Issue 250 - PixelIterator returns pixels outside image Issue 162 - MuhRec Open saved config doesn't update correctly Issue 130 - CBCT writes detector pixel size in slices Issue 120 - Recon crash with file list Issue 95 - ImageViewerWidget data interval with NaNs and Infs Issue 48 - MuhRec - Extend projection preview Issue 39 - Morph spot clean performance tuning Issue 23 - Config files compatible cross platform

Related Organizations
Keywords

CT reconstruction, Image processing, Neutron imaging, GUI

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selected citations
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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