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ZENODO
Dataset . 2020
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2020
License: CC BY
Data sources: ZENODO
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ZENODO
Dataset . 2020
License: CC BY
Data sources: Datacite
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Kraken 2.0.8 beta taxonomic binning of the CAMI 2 Mouse Gut Toy data set, gold standard pooled assembly

Research datakeyboard_double_arrow_right Dataset 28 Jan 2020Publisher:Zenodo
Authors: Meyer, Fernando;

doi: 10.5281/zenodo.3629600 , 10.5281/zenodo.3629599

Kraken 2.0.8 beta taxonomic binning of the CAMI 2 Mouse Gut Toy data set, gold standard pooled assembly

Abstract

Taxonomic binning of the gold standard pooled assembly Software: Kraken SoftwareVersion: 2.0.8 beta DataURL: https://data.cami-challenge.org/participate SoftwareURL: https://ccb.jhu.edu/software/kraken2/ ReferenceDatabase: built 2019-05-22 Taxonomy: NCBI 2019-05-22 ShortReadsUsed: False LongReadsUsed: False CommandUsed: kraken2-build --standard --db kraken2db_std --use-ftp kraken2 --db kraken2db_std --threads 16 --output 19122017_mousegut_scaffolds.kraken --report 19122017_mousegut_scaffolds.kreport anonymous_gsa_pooled.fasta cat 19122017_mousegut_scaffolds | awk '{print $2 "\t" $3}' > 19122017_mousegut_scaffolds.cami

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Keywords

metagenomics, taxonomic binning, CAMI 2 Mouse Gut Toy data set

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This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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