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ZENODO
Dataset . 2019
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2019
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2019
License: CC BY
Data sources: ZENODO
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Claim

Genome–scale approach to study the genetic relatedness among Brucella melitensis strains - wgMLST schema for Brucella melitensis

Research datakeyboard_double_arrow_right Dataset 13 Dec 2019Publisher:Zenodo
Authors: Pelerito, Ana; Nunes, Alexandra; Núncio, MS; Gomes, JP;

doi: 10.5281/zenodo.3575025 , 10.5281/zenodo.3575026

Genome–scale approach to study the genetic relatedness among Brucella melitensis strains - wgMLST schema for Brucella melitensis

Abstract

wgMLST schema for Brucella melitensis Schema creation The wgMLST schema was created using the 60 complete genomes of Brucella melitensis available at NCBI, as of January 2019, with the chewBBACA v2.0.11 suite (https://github.com/B-UMMI/chewBBACA), using a training file generated by Prodigal v2.6.3 from the B. melitensis 16M reference genome (RefSeq Accession NC_003317 and NC_003318). For curation and validation, the wgMLST schema was further populated with 212 additional draft genomes: 157 draft genomes (downloaded from NCBI in January 2019) and 55 draft genomes assembled with INNUca v3.1 (PRJEB30030). File 'Bmelitensis_wgMLST_2656_schema.tar.gz' contains the wgMLST schema formatted for chewBBACA and includes a total of 2656 loci.

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