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PyPulseq: A Python Package for MRI Pulse Sequence Design

Authors: Ravi, Keerthi Sravan; Geethanath, Sairam; Vaughan Jr., John Thomas;

PyPulseq: A Python Package for MRI Pulse Sequence Design

Abstract

{"references": ["Layton, Kelvin J., et al. \"Pulseq: a rapid and hardware\u2010independent pulse sequence prototyping framework.\" Magnetic resonance in medicine 77.4 (2017): 1544-1552.", "Ravi, Keerthi Sravan et al. \"MR Value driven Autonomous MRI using imr-framework.\" ISMRM Workshop on Machine Learning Part II (2018).", "Ravi, Keerthi Sravan et al. \"imr-framework for rapid design and deployment of non-Cartesian sequences.\" i2i Workshop (2018).", "Ravi, Keerthi Sravan, et al. \"Pulseq-Graphical Programming Interface: Open source visual environment for prototyping pulse sequences and integrated magnetic resonance imaging algorithm development.\" Magnetic resonance imaging 52 (2018): 9-15.", "Tong, Gehua et al. \"Virtual MR Scanner Software.\" ISMRM 27th Annual Meeting and Exhibition (2019).", "Jochimsen, Thies H., and Michael Von Mengershausen. \"ODIN\u2014object-oriented development interface for NMR.\" Journal of Magnetic Resonance 170.1 (2004): 67-78.", "Magland, Jeremy F., et al. \"Pulse sequence programming in a dynamic visual environment: SequenceTree.\" Magnetic resonance in medicine 75.1 (2016): 257-265.", "Nielsen, Jon\u2010Fredrik, and Douglas C. Noll. \"TOPPE: A framework for rapid prototyping of MR pulse sequences.\" Magnetic resonance in medicine 79.6 (2018): 3128-3134.", "Poojar, Pavan, et al. \"Rapid prOtotyping of 2D non-CartesIan K-space trajEcTories (ROCKET) using Pulseq and GPI.\" Critical Reviews\u2122 in Biomedical Engineering.", "Ravi, Keerthi Sravan et al. \"Autonomous scanning using imr-framework to improve MR accessibility.\" ISMRM Workshop on Accessible MRI for the World (2019).", "Ravi, Keerthi Sravan et al. \"Self-administered exam using Autonomous Magnetic Resonance Imaging (AMRI).\" ISMRM 27th Annual Meeting and Exhibition (2019)."]}

Pulse sequence design is a significant component of MRI research. However, multi-vendor studies require researchers to be acquainted with each hardware platform's programming environment. PyPulseq enables vendor-neutral pulse sequence design in Python [1]. The pulse sequences can be exported as a .seq file to be run on Siemens/GE/Bruker hardware by leveraging their respective Pulseq interpreters. This tool is targeted at MRI pulse sequence designers, researchers, students and other interested users. It is a translation of the Pulseq framework originally written in Matlab [2].

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Keywords

python, pulse sequences, pulseq, mri

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