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broadinstitute/viral-ngs: v1.15.0

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 21 Feb 2017Publisher:Zenodo
Authors: Daniel Park; Chris Tomkins-Tinch; Irwin Jungreis; Simon Ye; haydenm; Hanna; Mike Lin; +1 Authors
Code repository: https://github.com/broadinstitute/viral-ngs/tree/v1.15.0

doi: 10.5281/zenodo.321412 , 10.5281/zenodo.326159 , 10.5281/zenodo.321424 , 10.5281/zenodo.321420 , 10.5281/zenodo.375664 , 10.5281/zenodo.321687 , 10.5281/zenodo.321909

broadinstitute/viral-ngs: v1.15.0

Abstract

New: Improvements to the pipeline to support single-end reads in additional stages, including the depletion, filtering, and metagenomic steps (blastn, bmtagger, trimmomatic, mvicuna, kraken) Scripts added related to auto deployment of viral-ngs conda package Updated/changed: novoalign 3.04.04 -> 3.06.05

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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