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Presentation . 2019
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Presentation . 2019
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Other literature type . 2019
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Creating Interactive Scientific Publications using Bindings

Authors: Konkol, Markus;

Creating Interactive Scientific Publications using Bindings

Abstract

Many scientific publications report on computational results based on code and data, but even when code and data are published, the main text is usually provided in a separate, traditional format such as PDF. Since code, data, and text are not linked on a deep level, it is difficult for readers and reviewers to understand and retrace how the authors achieved a specific result that is reported in the main text, e.g. a figure, table, or number. In addition, to make use of new the opportunities afforded by data and code availability, such as re-running analyses with changed parameters, considerable effort is required. In order to overcome this issue and to enable more interactive publications that support scientists in more deeply exploring the reported results, we present the concept, implementation, and initial evaluation of bindings. A binding describes which data subsets, code lines, and parameters produce a specific result that is reported in the main text (e.g. a figure or number). Based on a prototypical implementation of these bindings, we propose a toolkit for authors to easily create interactive figures by connecting specific UI widgets (e.g. a slider) to parameters. In addition to inspecting code and data, readers can then manipulate the parameter and see how the results change. We evaluated the approach by applying it to a set of existing articles. The results provide initial evidence that the concept is feasible and applicable to many papers with moderate effort.

Keywords

research compendia, open science, interactive papers, reproducible research

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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