Characterizing Novel Olfactory Receptors Expressed in the Murine Renal Cortex: Supplemental Table S2

Research datakeyboard_double_arrow_right Dataset 06 Apr 2019Publisher:ZenodoFunded by:NIH | Renal Olfactory Receptor ..., NIH | Uncovering the Functional...

Authors: Halperin Kuhns, Victoria L.; Sanchez, Jason; Sarver, Dylan C.; Khalil, Zoya; Rajkumar, Premraj; Marr, Kieren A.; Pluznick, Jennifer L.;

doi: 10.5281/zenodo.2630933 , 10.5281/zenodo.2630934

Characterizing Novel Olfactory Receptors Expressed in the Murine Renal Cortex: Supplemental Table S2

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Abstract

Olfactory receptors selected for study. Olfactory receptors (ORs) selected for study based on mapped reads in at least 7 out of 8 murine renal cortex samples. Murine samples are listed as A - M. Samples A - G were fed high fat diet, while samples I - M were fed control diet. (mm10) FPKM counts for ORs selected for study based on the GRCm30/mm10 genome build using previously published OR coordinates. ORs are listed using the "Olfr" gene names, as well as the "CUFFOR" names as determined by Ibarra-Soria X et al. (mm9) FPKM counts for ORs selected for study based on the NCBI37/mm9 genome build using established coordinates. ORs listed in green were identified and cloned from kidney RNA previously. Data accessible at NCBI GEO database, accession number GSE117249 https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE117249

Coordinates used from Ibarra-Soria X, Levitin MO, Saraiva LR, and Logan DW. The olfactory transcriptomes of mice. PLoS genetics 10: e1004593, 2014. (Dataset6.gtf)

Keywords

Olfactory Receptor, RNA Seq, G Protein Coupled Receptor, mouse

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