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ZENODO
Software . 2017
License: http://www.apache.org/licenses/LICENSE-2.0
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Software . 2017
License: http://www.apache.org/licenses/LICENSE-2.0
Data sources: ZENODO
Claim

framed v0.3.2

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 12 Jan 2017Publisher:Zenodo
Authors: Daniel Machado;
Code repository: https://github.com/cdanielmachado/framed/tree/0.3.2

doi: 10.5281/zenodo.240430

Abstract

framed is a python package for analysis and simulation of metabolic models. The main focus is to provide support for different modeling approaches. Modeling: Constraint-based models, Kinetic models, Bioprocess models I/O: Import/Export from SBML and/or plain text formats Solver support: Gurobi, CPLEX, GLPK COBRA tools: Simulation: FBA, pFBA, loopless-FBA, MOMA, linearMOMA, ROOM Analysis: FVA, gene essentiality, PhPP, flux envelope plots Omics integration: GIMME, E-Flux Strain design: brute force, hill climbing Kinetic tools: Time-course and steady-state simulation Parameter and flux sampling Calibration from metabolomics data Bioprocess modeling: Dynamic FBA (single and multi-species)

Keywords

python metabolism modeling

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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