Arachne: an OWL RL reasoner applied to gene ontology causal activity models (and beyond)

descriptionPublicationkeyboard_double_arrow_right Article , Other ORP type , Conference object 08 Oct 2018 United States Publisher:F1000 Research LtdFunded by:NIH | Gene Ontology Consortium

Authors: Balhoff, James P.; Good, Benjamin M.; Carbon, Seth; Mungall, Christopher J.;

doi: 10.7490/f1000research.1116194.1 , 10.5281/zenodo.2397191 , 10.5281/zenodo.2397192

Arachne: an OWL RL reasoner applied to gene ontology causal activity models (and beyond)

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Abstract

Arachne is an RDF rule engine with support for efficient reasoning with large OWL RL terminologies. Arachne is being used by the Gene Ontology (GO) Consortium to provide real-time reasoning within the Noctua modeling tool while creating GO “Causal Activity Models”.

Country

United States

Related Organizations

University of North Carolina at Chapel Hill
United States
University of California, San Francisco
United States
Lawrence Berkeley National Laboratory
United States
Renaissance Computing Institute
United States

Keywords

Gene Ontology, rules, Information systems, SWRL, 004, OWL, RDF

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