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github.com/iwc-workflows/Assembly-Hifi-HiC-phasing-VGP4/main

integration_instructionsResearch softwarekeyboard_double_arrow_right Software Under curationPublisher:Zenodo
Authors: Delphine Lariviere; Galaxy; VGP;

doi: 10.5281/zenodo.21907378

github.com/iwc-workflows/Assembly-Hifi-HiC-phasing-VGP4/main

Abstract

Assemble Genome using PacBio HiFi and HiC data from the same individual for phasing. Prerequisite: Run k-mer profiling workflow (VGP1). This workflow uses HiFiasm for contigging, and generates assembly statistics, Compleasm reports, Merqury histograms, and the genome assembly contigs in fasta and GFA format.

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