MYOD1-related enhancer nexus analysis

R scripts used to identify MYOD1-related loop-chained enhancer modules, characterize enhancer nexus connectivity, link enhancer modules to gene promoters, and calculate ABC-like regulatory scores in WT and SMCHD1-KO cells.

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Keywords

enhancer nexus, MYOD1, SMCHD1, chromatin architecture, activity-by-contact, loop chaining, super-enhancers, gene regulation, chromatin loops

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