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Dataset
Data sources: ZENODO
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Yokogawa CV7000 synthetic regression dataset for new reader

Authors: Paul, Kilian;

Yokogawa CV7000 synthetic regression dataset for new reader

Abstract

CV7000 Synthetic Test Data This dataset contains small synthetic Yokogawa CV7000 packages for testing CV7000Reader behavior. Each package is self-contained and can be used independently. Package Layout Each cv7000-synthetic-* package follows the same layout: data/ contains the .wpi entrypoint, Yokogawa sidecars, and small constant uint16 TIFF planes. bioformats-config/data/.bioformats contains the authoritative automated-test expectations for the .wpi entrypoint and CV7000Reader. references/ contains generated OME-XML references for the package. bioformats-config/references/.bioformats contains automated-test expectations for the OME-XML reference and OMEXMLReader. Some packages intentionally include metadata-only plane records, missing backing TIFFs, or incomplete sidecar metadata. Package READMEs describe the specific regression behavior being exercised. Expected Output The expected reader metadata is captured in the package-local .bioformats files, and the generated OME-XML expectations are captured under references/. The synthetic TIFF planes use simple constant uint16 pixel values so backed planes are easy to verify. Running Automated Tests From a Bio-Formats checkout, run a full package test with the package root as the data directory and the package-local bioformats-config/ directory as the config root: cd components/test-suite ant -Dtestng.directory=/path/to/<package> \ -Dtestng.configDirectory=/path/to/<package>/bioformats-config \ test-automated That form tests both the .wpi entrypoint under data/ and the generated OME-XML reference under references/. To test only the .wpi entrypoint, point both properties at the corresponding data subtrees: cd components/test-suite ant -Dtestng.directory=/path/to/<package>/data \ -Dtestng.configDirectory=/path/to/<package>/bioformats-config/data \ test-automated Changelog 1.0.0 : First Version. 2.0.0 : Expanded the CV7000 synthetic test data from 9 to 14 packages. Added regressions for namespace-independent parsing, shading-correction filename resolution, channel-mapping fallbacks, duplicate-plane source selection, and repeated MRF channel metadata. Updated existing fixtures and OME-XML expectations to cover 12-bit metadata, MLF/PPF provenance, raw-sidecar preservation/compression, and bounded provenance output.

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