Trim Galore

Trim Galore is a single-binary adapter and quality trimmer for FASTQ files, with built-in support for bisulfite sequencing (RRBS, WGBS, EM-seq), poly-G / poly-A trimming, paired-end validation, UMI-aware specialty modes (--clock, --implicon), inline demultiplexing, and an integrated FastQC report. The v2.x line is a Rust rewrite of the original Perl Trim Galore (v0.6.x) and is byte-for-byte compatible with v0.6.11 on the core flag paths covered by CI.

Related Organizations

Altos Labs
United States
University of Oxford
United Kingdom

Keywords

FastQC, RRBS, NGS, quality-trimming, Sequence analysis, bisulfite-sequencing, bioinformatics, FASTQ, adapter-trimming

Impact byBIP!

	selected citations These citations are derived from selected sources. This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	40
	popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.	Top 10%
	influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	Top 10%
	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average