PINPOINT: AlphaFold multimer screening of M.pheaselina orphan proteins against soybean serine and cysteine proteases.
PINPOINT: AlphaFold multimer screening of M.pheaselina orphan proteins against soybean serine and cysteine proteases.
Fine tuned Protein lanuguage models for protease inhibtor prediction : PIPES-M-model.rar and PIP-BERT.rar Strcture aware autoencoder hyperparamtuned model: Alphafold Multimer raw scores when screening 116 predicted protease inhibtor and 43 predicted non protease inhibitor against siybean immune proteases : AFM_scores.rar AlphaFold mulimer outputs JSON and PDBs for 116 predicted protease inihibtors screened against soybean serine protease: Sprotease-MAPH-116_positivehits_out.rar AlphaFold mulimer outputs JSON and PDBs for 116 predicted protease inhibtors screened against soybean cysteine protease: PDB_cprotease_pos116_out.rar AlphaFold mulimer outputs JSON and PDBs for 43 predicted non-proteases inhibitors screened against soybean serine protease: Sprotease_43_negativehits_out.rar AlphaFold mulimer outputs JSON and PDBs for 43 predicted non-proteases inhibitors screened against soybean cysteine protease: Cprotease_43_negativehits_out.rar
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