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ZENODO
Software
Data sources: ZENODO
Zenodo
Claim

github.com/broadinstitute/viral-pipelines/classify_multi

integration_instructionsResearch softwarekeyboard_double_arrow_right Software Under curationPublisher:Zenodo
Authors: Broad Viral Genomics;

doi: 10.5281/zenodo.20511120

github.com/broadinstitute/viral-pipelines/classify_multi

Abstract

Runs raw reads through taxonomic classification (Kraken2), human read depletion (based on Kraken2), de novo assembly (SPAdes), and FASTQC/multiQC of reads.

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