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Code and data sets for "iDeepLC: chemical structure information yields improved retention time prediction of peptides with unseen modifications" to generate manuscript figures

integration_instructionsResearch softwarekeyboard_double_arrow_right Other software type Under curationPublisher:ZenodoFunded by:EC | PROTrEIN
Authors: Nameni, Alireza; Declercq, Arthur; Gabriels, Ralf; Devreese, Robbe; Martens, Lennart; Degroeve, Sven; Bouwmeester, Robbin;

doi: 10.5281/zenodo.20492553

Code and data sets for "iDeepLC: chemical structure information yields improved retention time prediction of peptides with unseen modifications" to generate manuscript figures

Abstract

Scripts used to train iDeepLC models, evaluate retention time predictions and generate manuscript figures. After unzipping the "Zenodo_iDeepLC.zip" file, see README.md for detailed information on how to generate figures and how the folder structure needs to be.

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