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Conference object . 2026
License: CC BY
Data sources: Datacite
ZENODO
Conference object . 2026
License: CC BY
Data sources: Datacite
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[OME2026] Poster and Lightning Talk: OME-Arrow: Unifying Images, Metadata, and Features in an Interoperable Data Model

Authors: Bunten, David; Tomkinson, Jenna; Lippincott, Michael; Mattson, Cameron; Curd, Julia Bronte; Way, Gregory;

[OME2026] Poster and Lightning Talk: OME-Arrow: Unifying Images, Metadata, and Features in an Interoperable Data Model

Abstract

Abstract: Modern bioimaging workflows increasingly combine images, metadata, and derived measurements across many tools and platforms. Enabling these components to work together seamlessly is key to interoperable and scalable analysis. OME-Arrow (https://github.com/WayScience/ome-arrow) is a project that applies Open Microscopy Environment (OME) conventions through Apache Arrow to integrate imaging data with modern analytical workflows. By representing images as Arrow-compatible structures alongside metadata and features, OME-Arrow enables programmatic and relational access using a consistent data model across languages while supporting familiar tools such as SQL engines, DuckDB, and Parquet-based pipelines. The library supports ingestion from TIFF, OME-Zarr, and NumPy, with export to OME-Parquet, OME-Zarr, and OME-TIFF, along with lazy scan-style access for large datasets and tensor pathways for machine learning. OME-Arrow also integrates with napari-ome-arrow for visualization and CytoDataFrame for scalable feature-centric workflows, offering a modular, standards-aligned approach that complements the broader open bioimaging ecosystem.

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OMEmeeting2026

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
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