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JosephLalli/phasing_T2T: v2.0

Authors: Joseph Lalli;

JosephLalli/phasing_T2T: v2.0

Abstract

Code and input datasets (excluding those related to recombination maps) used to generate resubmitted phased 1KGP T2T paper "A T2T-CHM13 recombination map and globally diverse haplotype reference panel improves phasing and imputation" What's Changed Updated imputation evaluation results to reflect use of latest version of LiftoverIndel Code has been completely refactored to improve readability and ensure portability Docker container to make replication easier Better documentation of workflow used to generate analysis Full Changelog: https://github.com/JosephLalli/phasing_T2T/compare/v1.1...v2.0

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