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ZENODO
Dataset
Data sources: ZENODO
Zenodo
Claim

Phylogeny-aided detection of contamination in nearly 5 million SARS-CoV-2 genomes

Research datakeyboard_double_arrow_right Dataset Under curation English Publisher:Zenodo
Authors: Anoufa, Olivier; Ly-Trong, Nhan; Goldman, Nick; De Maio, Nicola;

doi: 10.5281/zenodo.19815950

Phylogeny-aided detection of contamination in nearly 5 million SARS-CoV-2 genomes

Abstract

Zenodo repository of "Phylogeny-aided detection of contamination in nearly 5 million SARS-CoV-2 genomes". This repository contains: a reference tree built using MAPLE, of 785,011 samples that passed filtering steps; a MAPLE alignment of 4,952,451 samples with masked positions; a list of 10,942 flagged putatively contaminated samples. Those files were generated using PhyCD with default parameters.

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