BERTology of Molecular Property Prediction (Data Size Effect: Base-BERT, Part 1)
BERTology of Molecular Property Prediction (Data Size Effect: Base-BERT, Part 1)
Data Size Effects on Pre-Training Base-BERT (Part 1) This record pertains to Data Size Effects on Pre-Training Experiments. It involves the following files: base-binidx-0-ms-1234-ds-1234.tar.gz base-binidx-0-ms-1234-ds-2345.tar.gz base-binidx-0-ms-2345-ds-1234.tar.gz base-binidx-1-ms-1234-ds-1234.tar.gz base-binidx-1-ms-1234-ds-2345.tar.gz base-binidx-1-ms-2345-ds-1234.tar.gz Each tar file contains all model artifacts (checkpoints, random-number generator states, optimizer states etc.), training logs (Tensorboard, MLFlow and Weights & Biases), and evaluation results, configuration files, run scripts, SLURM sbatch driver scripts, and any additional artifacts generated during the experiments. Preprint: https://doi.org/10.48550/arXiv.2603.13627
- Virginia Tech United States
- Molecular Sciences Software Institute United States
Masked language modeling, Molecular property prediction, ADME, Pretraining, Finetuning, Chemical language models, BERT
Masked language modeling, Molecular property prediction, ADME, Pretraining, Finetuning, Chemical language models, BERT
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