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InteractiveResource . 2026
License: CC BY
Data sources: ZENODO
ZENODO
InteractiveResource . 2026
License: CC BY
Data sources: Datacite
ZENODO
InteractiveResource . 2026
License: CC BY
Data sources: Datacite
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Nextflow for reproducible and automated data analysis

Authors: Lavaerts, Kobe; Vannieuwkerke, Nicolas;

Nextflow for reproducible and automated data analysis

Abstract

This hands-on training is designed to help you build scalable, reproducible data analysis pipelines using Nextflow. As data volumes grow and analyses become more complex, mastering workflow management tools is essential for ensuring reproducibility and efficiency. In this course, you'll learn how to develop and run pipelines on your local machine, HPC clusters, and cloud platforms. Starting from the basics, we'll guide you through building a simple pipeline and progressively enhance it using Nextflow's modern DSL2 syntax. By the end, you'll be equipped with practical skills to streamline your own analyses and collaborate more effectively across computational environments

Keywords

Nextflow, Automated data analysis, Workflow

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average