Abstract This guide is based on the IBM Quantum course Phase Estimation and Factoring and focuses on one of the most important breakthroughs in quantum computing: the quantum phase estimation (QPE) algorithm and its application to Shor’s factoring algorithm. The lesson begins with the phase estimation problem, Solving this problem efficiently is a cornerstone of many quantum algorithms. Spectral Theorem and Mathematical Foundations The discussion starts with the spectral theorem from linear algebra. In the context of this lesson, it is applied to unitary matrices, which can be diagonalized in an orthonormal eigenbasis. This property makes it possible to extract phase information using interference effects and controlled unitary operations. Later, the same mathematical framework extends to Hermitian operators, which are central to quantum mechanics and Hamiltonian simulation. Quantum Phase Estimation (QPE) The Quantum Phase Estimation algorithm combines: Controlled unitary operations Superposition and interference The Quantum Fourier Transform (QFT) The QFT plays a crucial role by transforming phase information encoded in amplitudes into measurable computational basis states. Importantly, the QFT can be implemented efficiently with a quantum circuit whose complexity scales polynomially with the number of qubits. From Phase Estimation to Shor’s Algorithm By applying QPE to a specific modular exponentiation operator, one obtains Shor’s algorithm, an efficient quantum algorithm for integer factorization. Shor’s algorithm demonstrates an exponential speedup over the best-known classical factoring algorithms and has profound implications for cryptography, particularly for RSA-based systems. Significance This lesson illustrates a major milestone in quantum computing: It connects abstract linear algebra (spectral theorem) to concrete algorithmic advantage. It shows how quantum interference enables extraction of hidden periodicity. It demonstrates a real-world cryptographic impact through efficient factorization. Through hands-on experimentation on IBM Q, theoretical concepts are translated into working quantum circuits, reinforcing the deep relationship between mathematics, algorithm design, and quantum computational power.