
This repository documents the read trimming, mapping, and quantification workflow used in Hosseini Khorami et al. (2026). Its purpose is to provide a detailed and transparent description of the computational procedures applied to the Illumina NovaSeq sequencing data analyzed in the study. The results generated using this workflow are reported in the associated publication. This repository is intended for documentation and reproducibility purposes and does not constitute a general-purpose analysis pipeline. Users interested in reproducing the analyses should refer to the original publication for context.
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