Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Book . 2026
License: CC BY
Data sources: ZENODO
ZENODO
Book . 2026
License: CC BY
Data sources: Datacite
ZENODO
Book . 2026
License: CC BY
Data sources: Datacite
versions View all 2 versions
addClaim

TxPredictor - The Handbook

Authors: Mehler, Hilary; Schimanski, Andreas; Gerritsen, Bram; Matern, Benedict M.; Niemann, Matthias;

TxPredictor - The Handbook

Abstract

In the evolving landscape of transplant medicine, the shift from traditional antigen-level matching to molecular matching represents a definitive leap forward in our ability to predict and prevent alloimmune responses. This booklet is dedicated to the science and application of two complementary computational technologies delivered by the TxPredictor: PIRCHE and Snow molecular matching. Together, these tools redefine how we view immunological compatibility by addressing both arms of the adaptive immune response. Invented by Eric Spierings at the University Medical Center Utrecht in the Netherlands, the PIRCHE algorithm is designed to quantify the risk of indirect alloresponse in transplantation. PIRCHE predicts the specific mismatched peptides likely to be presented by HLA to T-cells (i.e. T-cell epitopes). The later developed PIRCHE Snow algorithm focuses on antibody recognition, utilizing advanced structural modeling to predict which mismatched amino acids on the donor HLA surface are accessible to antibodies (i.e. B-cell epitopes). By combining the T-cell perspective of PIRCHE with the antibody-accessibility insights of Snow, TxPredictor enables a "dual-pathway" view of immunological risk that classic antigen matching misses. Within The Handbook, you will find a comprehensive overview of the biological mechanisms driving allorecognition, a summary of the robust clinical evidence linking these scores - both individually and in conjunction - to dnDSA formation, rejection and graft survival, as well as a practical user guide for integrating TxPredictor into your workflow. Our goal is to empower you with the tools to move towards truly personalized, comprehensive risk stratification for improved patient management.

Keywords

Transplant Immunology, Molecular Matching, Epitope Matching

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
Powered by OpenAIRE graph
Found an issue? Give us feedback
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Green