
data.tar.gz file This compressed file stores raw BED files and sample sheets. What each major folder Janssens_Lab_Data/ Primary BED data files from BMMC (Bone marrow sample) and PBMC samples. BMMC_Beds/ --- T cell depleted Bone marrow samples PBMCs_Combined_Beds/ --- Peripheral blood mononuclear cell samples Bone marrow sample sheets: sample_sheet_PR001798.tsv, sample_sheet_PR001799.tsv, sample_sheet_PR001855.tsv, sample_sheet_PR001856.tsv The BED files format The BED files include the following columns without header: First column: chromosome name (e.g., chr1, chr2, etc.) Second column: start position of the genomic region Third column: end position of the genomic region Fourth column: name of the Cell barcode Fifth column: the number of fragments in the genomoic region for the cell barcode
