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Jalview

Authors: Procter, Jim (James) B.; Carstairs, Mungo; Soares, Ben; Correya, Renia; Mourão, Kira; Ofoegbu, Tochukwu 'Charles'; Warowny, Mateusz; +19 Authors

doi: 10.5281/zenodo.18652770 , 10.5281/zenodo.18652503 , 10.5281/zenodo.18652669 , 10.5281/zenodo.18652357 , 10.5281/zenodo.18652675 , 10.5281/zenodo.18652203 , 10.5281/zenodo.18652347 , 10.5281/zenodo.18652218 , 10.5281/zenodo.18652190 , 10.5281/zenodo.18652668 , 10.5281/zenodo.18652703 , 10.5281/zenodo.18652267 , 10.5281/zenodo.18652853 , 10.5281/zenodo.18652167 , 10.5281/zenodo.18652674 , 10.5281/zenodo.18652897 , 10.5281/zenodo.18652785 , 10.5281/zenodo.18652818 , 10.5281/zenodo.18652356 , 10.5281/zenodo.18652865 , 10.5281/zenodo.18652343 , 10.5281/zenodo.18652874 , 10.5281/zenodo.18652806 , 10.5281/zenodo.18652184 , 10.5281/zenodo.18652255 , 10.5281/zenodo.18652508 , 10.5281/zenodo.18652237 , 10.5281/zenodo.18652204 , 10.5281/zenodo.18652260 , 10.5281/zenodo.18652427 , 10.5281/zenodo.18652318 , 10.5281/zenodo.18652834 , 10.5281/zenodo.18652385 , 10.5281/zenodo.18653059 , 10.5281/zenodo.18652796 , 10.5281/zenodo.18652852 , 10.5281/zenodo.18652443 , 10.5281/zenodo.18652731 , 10.5281/zenodo.18652191 , 10.5281/zenodo.18652268 , 10.5281/zenodo.18652369 , 10.5281/zenodo.18652251 , 10.5281/zenodo.18652456 , 10.5281/zenodo.18652742 , 10.5281/zenodo.18652807 , 10.5281/zenodo.18652890 , 10.5281/zenodo.18652252 , 10.5281/zenodo.18652401 , 10.5281/zenodo.18652497 , 10.5281/zenodo.18652498 , 10.5281/zenodo.18652771 , 10.5281/zenodo.18652344 , 10.5281/zenodo.18652259 , 10.5281/zenodo.18652730 , 10.5281/zenodo.18652415 , 10.5281/zenodo.18652236 , 10.5281/zenodo.18652504 , 10.5281/zenodo.18652211 , 10.5281/zenodo.18652880 , 10.5281/zenodo.18652168 , 10.5281/zenodo.18652688 , 10.5281/zenodo.18652198 , 10.5281/zenodo.18652889 , 10.5281/zenodo.18652426 , 10.5281/zenodo.18652177 , 10.5281/zenodo.18652175 , 10.5281/zenodo.18652335 , 10.5281/zenodo.18652256 , 10.5281/zenodo.18652226 , 10.5281/zenodo.18653060 , 10.5281/zenodo.18652704 , 10.5281/zenodo.18652245 , 10.5281/zenodo.18652199 , 10.5281/zenodo.18652317 , 10.5281/zenodo.18652457 , 10.5281/zenodo.18652348 , 10.5281/zenodo.18652817 , 10.5281/zenodo.18652219 , 10.5281/zenodo.18652414 , 10.5281/zenodo.18652762 , 10.5281/zenodo.18652225 , 10.5281/zenodo.18652442 , 10.5281/zenodo.18652244 , 10.5281/zenodo.18652386 , 10.5281/zenodo.18652336 , 10.5281/zenodo.18652881 , 10.5281/zenodo.18652370 , 10.5281/zenodo.18652786 , 10.5281/zenodo.18652183 , 10.5281/zenodo.18652743 , 10.5281/zenodo.18652174 , 10.5281/zenodo.18652864 , 10.5281/zenodo.18652875 , 10.5281/zenodo.18652481 , 10.5281/zenodo.18652145 , 10.5281/zenodo.18652212 , 10.5281/zenodo.18652835 , 10.5281/zenodo.18652795 , 10.5281/zenodo.18652509 , 10.5281/zenodo.18652689 , 10.5281/zenodo.18652400 , 10.5281/zenodo.18652718 , 10.5281/zenodo.18652176 , 10.5281/zenodo.18652898 , 10.5281/zenodo.18652761 , 10.5281/zenodo.18652482 , 10.5281/zenodo.18652146 , 10.5281/zenodo.18652717

Abstract

Jalview is a free cross-platform program for multiple sequence alignment editing, visualisation and analysis. Use it to align, view and edit sequence alignments, analyse them with phylogenetic trees and principal components analysis (PCA) plots and explore molecular structures and annotation. Jalview 2.11.1.7 (18 January 2022) was the seventh patch release in the 2.11.1 series, addressing file handling issues on Windows and other non-Unix operating systems. It fixed a problem where files opened in Jalview could not be updated by either Jalview or other applications. The release also added support for AIA (Authority Information Access) download of HTTPS intermediate certificates, improving secure connection handling.

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    popularity
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    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average