Powered by OpenAIRE graph
Found an issue? Give us feedback
ZENODOarrow_drop_down
ZENODO
Dataset . 2026
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2026
License: CC BY
Data sources: Datacite
versions View all 2 versions
addClaim

Dataset for "Oxygen limitation is not a major physiological mechanism restricting early life development in zebrafish"

Authors: Silva-Garay, Lorena; Metz, Moa; Kristiansen, Henning H.; Pfeufer, Leon; Lechner, Emily R.; Ern, Rasmus; Andreassen, Anna H.; +1 Authors

Dataset for "Oxygen limitation is not a major physiological mechanism restricting early life development in zebrafish"

Abstract

This repository contains the raw and processed data underlying the study: “Oxygen limitation is not a major physiological mechanism restricting early life development in zebrafish.” The dataset includes morphometric, physiological, and survival measurements collected across two independent experiments (Experiment 1 and Experiment 2) designed to test the effects of oxygen availability (12.5, 25, 50, 100, and 200% air saturation) and temperature (15.7 to 39.3°C) on embryonic, larval, and juvenile zebrafish performance. All files are provided in .csv format and can be opened with standard spreadsheet software or statistical programming environments (R, Python, MATLAB, etc.). Each row corresponds to an individual or experimental unit (holding beaker), and columns contain measured traits and associated metadata (e.g., Oxygen treatment, Temperature treatment, developmental stage in hours post fertilizaton). File overview Embryo traits Yolk sac area – Experiment 1 (.csv)Quantified yolk sac area measurements from embryos (mm^2), used as a proxy for energy reserves and developmental progression. Yolk sac area – Experiment 2 (.csv)Same measurements as above for the independent replicate experiment. Heart rate – Experiment 2 (.csv)Embryonic heart rate measurements (Hertz, Hz), used as an indicator of metabolic and physiological performance. Larval traits Larval length – Experiment 1 (.csv)Standard body length measurements (mm) of larvae at the specified developmental stage. Larval length – Experiment 2 (.csv)Replicate dataset of larval body length measurements. Hatching rate and survival to first feeding – Experiment 1 (.csv)Hatching success and survival metrics quantified from embryo to first-feeding stage (e.g., see Larvae_count_cummulative, SurvivalToFeed). Hatching rate and survival to first feeding – Experiment 2 (.csv)Replicate measurements of hatching success and early survival. Juvenile traits Body size and CTmax – Experiments 1 & 2 (.csv)Juvenile body size measurements and critical thermal maximum (CTmax) values (in °C), used to assess growth and upper thermal tolerance. See columns Beaker_ID and Experiment to track fish individuals rearing origin. Experimental design notes Data originate from two independent experiments (Exp 1 and Exp 2) performed under controlled oxygen treatments. Traits span multiple life stages: embryo, larva, and juvenile. Measurements include: Morphology (yolk sac area, length, body size) Physiology (heart rate, CTmax) Performance and fitness proxies (hatching success, survival) Data structure Across files, columns typically include: Beaker or clutch ID Treatment (e.g., oxygen and temperature condition) Photo or video ID Developmental stage or time point Measured trait value(s) Exact variable names are specified within each file header. Code of paper plots and statistical analyses Code was developed in R studio (R software v4.4.1; R Core Team, 2024) and include two script files: Code used to produce paper plots (see Paper_Plots.R) Code used for statistical models (see Paper_Models.R)

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
Powered by OpenAIRE graph
Found an issue? Give us feedback
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average