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MercaderLabAnatomy/napari-tmidas: v0.3.3 - Complete Documentation Coverage & Link Fixes

Authors: Marco Meer;

MercaderLabAnatomy/napari-tmidas: v0.3.3 - Complete Documentation Coverage & Link Fixes

Abstract

๐Ÿ“š What's New Complete documentation coverage with new Batch Label Inspection guide and fixes for broken README links. โœจ Improvements New Documentation โœ… Added comprehensive Batch Label Inspection guide covering: Interactive label verification and editing workflow File matching logic and format validation Tips for efficient batch label quality control Real-world use cases (QC, boundary refinement, removing false positives) Troubleshooting guide for common issues Documentation Fixes โœ… Fixed broken README link for SAM2 Crop Anything (now points to correct crop_anything.md) โœ… Added Batch Label Inspection to Advanced Features section with proper documentation link โœ… Improved README organization and link accuracy ๐Ÿ“– Documentation Coverage napari-tmidas now has complete documentation for all major features: File Processing File Conversion - Multi-format microscopy conversion Batch Processing - Label operations and filters Interactive Tools Batch Crop Anything - AI-powered object segmentation with SAM2 Batch Label Inspection - Manual label verification and editing Deep Learning Features Cellpose Segmentation Trackastra Tracking CAREamics Denoising Spotiflow Detection VisCy Virtual Staining Analysis RegionProps Analysis Intensity Label Filtering Advanced Processing ๐ŸŽฏ User Experience Improvements All documentation now consistent with: Simplified installation instructions (single napari-tmidas[deep-learning] command) Clear workflow examples and use cases Comprehensive troubleshooting sections Performance tips and best practices ๐Ÿ“ฆ Installation # Install napari first mamba create -y -n napari-tmidas -c conda-forge python=3.11 mamba activate napari-tmidas python -m pip install "napari[all]" # Install napari-tmidas with all features pip install 'napari-tmidas[deep-learning]'

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average