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ZENODO
Software . 2026
Data sources: ZENODO
ZENODO
Software . 2026
Data sources: Datacite
ZENODO
Software . 2026
Data sources: Datacite
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MIA: Metadata Inspection Analyzer — A Lightweight Tool for Extracting Microscopy Source Parameters

Authors: Wang, Kui;

MIA: Metadata Inspection Analyzer — A Lightweight Tool for Extracting Microscopy Source Parameters

Abstract

MIA (Microscopy Information Assistant) v1.1.0 is a lightweight, 'idiot-proof' tool designed for biologists to instantly extract hidden metadata from microscopy files without writing code. As part of the Epivitae Biosensor Tools suite, MIA bridges the gap between complex Bio-Formats data and human-readable reports. v1.1.0 Release Highlights: 🚀 Drag & Drop Experience: Simply drag any microscopy file (.oir, .czi, .lif, .nd2) into the window to view dimensions, pixel size, and time intervals instantly. 🌈 Spectrum Mapping: Automatically visualizes Excitation/Emission wavelengths with color-coded indicators (e.g., ● Ex488), making channel identification intuitive. 🕵️‍♂️ Hybrid Parsing (Olympus .oir): Includes a specialized 'Range Hunter' engine to extract proprietary metadata hidden by Olympus, such as exact laser lines, emission filter ranges, and millisecond-precision time intervals. 📊 One-Click Export: Exports a professional CSV report compatible with Excel, containing both a formatted summary and the complete raw metadata table (UTF-8 BOM supported). Supported Formats: Olympus (.oir): Full Support (Hybrid Raw Parsing) Zeiss (.czi), Leica (.lif), Nikon (.nd2): Standard OME-XML Support Generic Formats: All formats supported by Bio-Formats 📧 Contact & Support:Kui WangEmail: k@cns.ac.cnInstitute: Center for Excellence in Brain Science and Intelligence Technology (CEBSIT), CAS

Related Organizations
Keywords

olympus-oir, lif, metadata, microscopy, imagej-plugin, java, imagej, fiji, bio-formats, czi, bioimage-analysis

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average