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ZENODO
Dataset . 2025
License: CC BY
Data sources: ZENODO
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
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Benchmarking_tissue_preparation_Stage2

Research datakeyboard_double_arrow_right Dataset 06 Dec 2025Publisher:Zenodo
Authors: Lee, Jia Le; Schaffenrath, Johanna; Wang, Cankun; Jiang, Sizun;

doi: 10.5281/zenodo.17843230 , 10.5281/zenodo.17843231

Benchmarking_tissue_preparation_Stage2

Abstract

This dataset consists of two folders: 1) data_mesmer, which contains the .csv files of single-cell marker signal intensity data from Mesmer cell segmentation for all experiments. These files were used as input for the data preprocessing and visualization pipeline. Refer to the ‘README.md’ for more details. 2) data_cellXpress, which contains the .csv files of single-cell marker signal intensity data from cellXpress2 cell segmentation for all experiments. These files were used as input for the data preprocessing and visualization pipeline. Refer to the ‘README.md’ for more details. Codes used can be found at https://github.com/SizunJiangLab/Benchmarking_tissue_preparation/ .

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average