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ZENODO
Software . 2025
License: http://opensource.org/licenses/MIT
Data sources: ZENODO
ZENODO
Software . 2025
License: https://opensource.org/licenses/MIT
Data sources: Datacite
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SynapTrack: An Automated Tool for Synapse Quantification

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 02 Dec 2025Publisher:Zenodo
Authors: Gallego-Garcia, Carlos; Martínez Blanco, Elena; Diez-Guerra, F. Javier;
Code repository: https://github.com/cgallego-garcia/SynapTrack/tree/v1.0.0

doi: 10.5281/zenodo.17795689

SynapTrack: An Automated Tool for Synapse Quantification

Abstract

First release of SynapTrack, an automated Fiji/ImageJ pipeline for quantifying synaptic contacts in neuronal cultures and tissue sections. Built on the SynQuant segmentation engine, it performs fully unsupervised detection and quantification of synaptic puncta from fluorescence image sets that include nuclei (DAPI), dendrites (MAP2), and pre- and postsynaptic markers for excitatory or inhibitory synapses.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average